Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ljam_1547 | Ljam_1881 | Ljam_1547 | Ljam_1881 | 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion. | Hypothetical protein. | 0.658 |
Ljam_1547 | eno | Ljam_1547 | Ljam_0231 | 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion. | Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis. | 0.743 |
Ljam_1547 | korA | Ljam_1547 | Ljam_1323 | 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.821 |
Ljam_1547 | tpi | Ljam_1547 | Ljam_1682 | 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.711 |
Ljam_1879 | Ljam_1880 | Ljam_1879 | Ljam_1880 | ABC transporter. | Hemolysin D. | 0.979 |
Ljam_1879 | Ljam_1881 | Ljam_1879 | Ljam_1881 | ABC transporter. | Hypothetical protein. | 0.536 |
Ljam_1879 | Ljam_1882 | Ljam_1879 | Ljam_1882 | ABC transporter. | Hypothetical protein. | 0.681 |
Ljam_1879 | Ljam_1883 | Ljam_1879 | Ljam_1883 | ABC transporter. | Hypothetical protein. | 0.416 |
Ljam_1880 | Ljam_1879 | Ljam_1880 | Ljam_1879 | Hemolysin D. | ABC transporter. | 0.979 |
Ljam_1880 | Ljam_1881 | Ljam_1880 | Ljam_1881 | Hemolysin D. | Hypothetical protein. | 0.536 |
Ljam_1880 | Ljam_1882 | Ljam_1880 | Ljam_1882 | Hemolysin D. | Hypothetical protein. | 0.613 |
Ljam_1881 | Ljam_1547 | Ljam_1881 | Ljam_1547 | Hypothetical protein. | 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion. | 0.658 |
Ljam_1881 | Ljam_1879 | Ljam_1881 | Ljam_1879 | Hypothetical protein. | ABC transporter. | 0.536 |
Ljam_1881 | Ljam_1880 | Ljam_1881 | Ljam_1880 | Hypothetical protein. | Hemolysin D. | 0.536 |
Ljam_1881 | Ljam_1882 | Ljam_1881 | Ljam_1882 | Hypothetical protein. | Hypothetical protein. | 0.797 |
Ljam_1881 | Ljam_1883 | Ljam_1881 | Ljam_1883 | Hypothetical protein. | Hypothetical protein. | 0.624 |
Ljam_1881 | Ljam_1884 | Ljam_1881 | Ljam_1884 | Hypothetical protein. | Hypothetical protein. | 0.440 |
Ljam_1881 | efp | Ljam_1881 | Ljam_2149 | Hypothetical protein. | Translation elongation factor P (EF-P); Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family. | 0.829 |
Ljam_1881 | eno | Ljam_1881 | Ljam_0231 | Hypothetical protein. | Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis. | 0.403 |
Ljam_1881 | korA | Ljam_1881 | Ljam_1323 | Hypothetical protein. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.650 |
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