Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
capL_2Protein capL; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (424 aa)    
Predicted Functional Partners:
wecB_2
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
 
 0.961
wecB_1
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
 
 0.889
Ljam_1901
NAD-dependent epimerase/dehydratase.
 
 0.880
epsL
Putative sugar transferase EpsL.
  
 
 0.862
Ljam_1899
Glycosyltransferase, family 2.
 
     0.809
cpsB
Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
    
 0.787
capI
Protein capI.
 
 
 0.732
Ljam_1010
Glycosyltransferase, group 1 family.
 
  
 0.730
capD
Nucleoside-diphosphate sugar epimerase.
 
 
 0.686
Ljam_1006
LPS O-antigen length regulator.
  
  
 0.677
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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