STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ljam_1905Metalloproteinase-like protein. (263 aa)    
Predicted Functional Partners:
ftsK
Cell division protein FtsK.
    
   0.786
Ljam_0917
Acid sphingomyelinase-like phosphodiesterase.
  
  
  0.696
Ljam_1906
Methyltransferase.
       0.664
Ljam_0503
Polyketide synthase.
 
 
 0.645
Ljam_1060
Polyketide synthase.
 
 
 0.641
Ljam_1904
Short chain-specific acyl CoA dehydrogenase.
       0.528
Ljam_1200
Cytosolic IMP-GMP specific 5'-nucleotidase.
  
     0.521
Ljam_2740
Serine metalloprotease; Belongs to the peptidase S8 family.
   
 0.518
Ljam_1882
Hypothetical protein.
  
     0.507
pepO
Metallopeptidase PepO, peptidase, M13 family transporter.
  
    0.493
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.