Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Ljam_0132 | Ljam_1607 | Ljam_0132 | Ljam_1607 | IcmF. | Putative membrane protein YdgA-like protein. | 0.723 |
| Ljam_0132 | Ljam_1949 | Ljam_0132 | Ljam_1949 | IcmF. | Palmitoyl transferase for Lipid A; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors. | 0.530 |
| Ljam_0132 | Ljam_2315 | Ljam_0132 | Ljam_2315 | IcmF. | 16 kD immunogenic protein. | 0.454 |
| Ljam_1365 | Ljam_1949 | Ljam_1365 | Ljam_1949 | Melitin resistance protein. | Palmitoyl transferase for Lipid A; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors. | 0.633 |
| Ljam_1365 | lpxK_2 | Ljam_1365 | Ljam_2855 | Melitin resistance protein. | Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). | 0.630 |
| Ljam_1365 | waaM | Ljam_1365 | Ljam_2202 | Melitin resistance protein. | Lipid A biosynthesis acyltransferase. | 0.677 |
| Ljam_1607 | Ljam_0132 | Ljam_1607 | Ljam_0132 | Putative membrane protein YdgA-like protein. | IcmF. | 0.723 |
| Ljam_1607 | Ljam_1949 | Ljam_1607 | Ljam_1949 | Putative membrane protein YdgA-like protein. | Palmitoyl transferase for Lipid A; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors. | 0.660 |
| Ljam_1607 | cmr | Ljam_1607 | Ljam_2906 | Putative membrane protein YdgA-like protein. | Multidrug efflux system protein. | 0.423 |
| Ljam_1949 | Ljam_0132 | Ljam_1949 | Ljam_0132 | Palmitoyl transferase for Lipid A; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors. | IcmF. | 0.530 |
| Ljam_1949 | Ljam_1365 | Ljam_1949 | Ljam_1365 | Palmitoyl transferase for Lipid A; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors. | Melitin resistance protein. | 0.633 |
| Ljam_1949 | Ljam_1607 | Ljam_1949 | Ljam_1607 | Palmitoyl transferase for Lipid A; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors. | Putative membrane protein YdgA-like protein. | 0.660 |
| Ljam_1949 | Ljam_1950 | Ljam_1949 | Ljam_1950 | Palmitoyl transferase for Lipid A; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors. | Amino acid transporter PotE. | 0.604 |
| Ljam_1949 | Ljam_1951 | Ljam_1949 | Ljam_1951 | Palmitoyl transferase for Lipid A; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors. | Proton transporter. | 0.560 |
| Ljam_1949 | Ljam_2315 | Ljam_1949 | Ljam_2315 | Palmitoyl transferase for Lipid A; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors. | 16 kD immunogenic protein. | 0.594 |
| Ljam_1949 | cmr | Ljam_1949 | Ljam_2906 | Palmitoyl transferase for Lipid A; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors. | Multidrug efflux system protein. | 0.695 |
| Ljam_1949 | hbp | Ljam_1949 | Ljam_1948 | Palmitoyl transferase for Lipid A; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors. | Hemin binding protein. | 0.588 |
| Ljam_1949 | lpxK_2 | Ljam_1949 | Ljam_2855 | Palmitoyl transferase for Lipid A; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors. | Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). | 0.599 |
| Ljam_1949 | waaM | Ljam_1949 | Ljam_2202 | Palmitoyl transferase for Lipid A; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors. | Lipid A biosynthesis acyltransferase. | 0.672 |
| Ljam_1950 | Ljam_1949 | Ljam_1950 | Ljam_1949 | Amino acid transporter PotE. | Palmitoyl transferase for Lipid A; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors. | 0.604 |
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