Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ljam_0756 | Ljam_1972 | Ljam_0756 | Ljam_1972 | Integral membrane protein, AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Outer membrane efflux protein. | 0.465 |
Ljam_0756 | Ljam_1973 | Ljam_0756 | Ljam_1973 | Integral membrane protein, AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Membrane-fusion protein AcrA. | 0.599 |
Ljam_0756 | Ljam_2612 | Ljam_0756 | Ljam_2612 | Integral membrane protein, AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Chemiosmotic efflux system protein C. | 0.425 |
Ljam_0756 | Ljam_2752 | Ljam_0756 | Ljam_2752 | Integral membrane protein, AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Multidrug efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.514 |
Ljam_1560 | Ljam_1971 | Ljam_1560 | Ljam_1971 | Hypothetical protein. | Protein with a bacterial immunoglobulin-like domain protein. | 0.658 |
Ljam_1560 | Ljam_1972 | Ljam_1560 | Ljam_1972 | Hypothetical protein. | Outer membrane efflux protein. | 0.741 |
Ljam_1560 | Ljam_1973 | Ljam_1560 | Ljam_1973 | Hypothetical protein. | Membrane-fusion protein AcrA. | 0.619 |
Ljam_1560 | Ljam_2038 | Ljam_1560 | Ljam_2038 | Hypothetical protein. | Hypothetical protein. | 0.772 |
Ljam_1971 | Ljam_1560 | Ljam_1971 | Ljam_1560 | Protein with a bacterial immunoglobulin-like domain protein. | Hypothetical protein. | 0.658 |
Ljam_1971 | Ljam_1972 | Ljam_1971 | Ljam_1972 | Protein with a bacterial immunoglobulin-like domain protein. | Outer membrane efflux protein. | 0.778 |
Ljam_1971 | Ljam_1973 | Ljam_1971 | Ljam_1973 | Protein with a bacterial immunoglobulin-like domain protein. | Membrane-fusion protein AcrA. | 0.701 |
Ljam_1971 | Ljam_1974 | Ljam_1971 | Ljam_1974 | Protein with a bacterial immunoglobulin-like domain protein. | ABC transporter ATP-binding protein. | 0.496 |
Ljam_1971 | Ljam_1975 | Ljam_1971 | Ljam_1975 | Protein with a bacterial immunoglobulin-like domain protein. | ABC transporter permease. | 0.558 |
Ljam_1971 | Ljam_2038 | Ljam_1971 | Ljam_2038 | Protein with a bacterial immunoglobulin-like domain protein. | Hypothetical protein. | 0.730 |
Ljam_1972 | Ljam_0756 | Ljam_1972 | Ljam_0756 | Outer membrane efflux protein. | Integral membrane protein, AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.465 |
Ljam_1972 | Ljam_1560 | Ljam_1972 | Ljam_1560 | Outer membrane efflux protein. | Hypothetical protein. | 0.741 |
Ljam_1972 | Ljam_1971 | Ljam_1972 | Ljam_1971 | Outer membrane efflux protein. | Protein with a bacterial immunoglobulin-like domain protein. | 0.778 |
Ljam_1972 | Ljam_1973 | Ljam_1972 | Ljam_1973 | Outer membrane efflux protein. | Membrane-fusion protein AcrA. | 0.958 |
Ljam_1972 | Ljam_1974 | Ljam_1972 | Ljam_1974 | Outer membrane efflux protein. | ABC transporter ATP-binding protein. | 0.857 |
Ljam_1972 | Ljam_1975 | Ljam_1972 | Ljam_1975 | Outer membrane efflux protein. | ABC transporter permease. | 0.900 |
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