STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ljam_1975ABC transporter permease. (397 aa)    
Predicted Functional Partners:
Ljam_1974
ABC transporter ATP-binding protein.
 0.999
Ljam_1844
ABC transporter ATP binding protein.
 0.997
lolD
ABC transporter ATP binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner.
 0.996
Ljam_1973
Membrane-fusion protein AcrA.
 
 
 0.939
Ljam_0539
ABC transporter ATP-binding protein.
     0.930
Ljam_1972
Outer membrane efflux protein.
 
 
 0.900
ftsE
Cell division ATP transporter FtsE; Part of the ABC transporter FtsEX involved in cellular division.
 
   
 0.885
Ljam_0220
ABC transporter ATP binding protein.
 
      0.734
ceaB
Chemiosmotic efflux system protein B-like protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.734
Ljam_1846
Membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.726
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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