STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ljam_2007Conserved protein of unknown function. (117 aa)    
Predicted Functional Partners:
Ljam_2710
Cation transport ATPase.
   
  0.950
coxB_2
Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
    
 0.805
puuB
Gamma-glutamylputrescine oxidoreductase.
 
 
 0.772
fadH
2,4-dienoyl-CoA reductase FadH1.
     
 0.752
Ljam_1438
Major facilitator family transporter.
  
 
 0.749
cycA
Cytochrome c.
    
  0.741
Ljam_1057
Choline monooxygenase.
    
 0.680
Ljam_1855
CDP-6-deoxy-delta-3,4-glucoseen reductase.
    
 0.664
Ljam_1547
2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion.
     
 0.656
Ljam_2400
Phosphate acetyl/butaryl transferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
     
 0.654
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.