STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ljam_2025Trehalose-6-phosphate synthase. (1178 aa)    
Predicted Functional Partners:
treF
Alpha,alpha-trehalase.
 
 0.951
Ljam_1703
Serine protein kinase.
   
    0.927
Ljam_2679
D-xylose reductase III.
   
    0.873
Ljam_1004
Glycosyl transferase, group 1.
  
 0.851
Ljam_1010
Glycosyltransferase, group 1 family.
  
 0.851
Ljam_1014
Hypothetical protein.
  
 0.851
osmC
Peroxiredoxin OsmC.
   
    0.850
galU
Glucose-1-phosphate uridylyltransferase.
    
 0.833
Ljam_0726
Glucoamylase.
    
 0.828
Ljam_2277
Putative Ser/Thr protein kinase.
    
 0.828
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.