Ljam_2056 protein (Legionella jamestowniensis)

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Ljam_2056

Nitrogen regulation protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. (320 aa)

Predicted Functional Partners:

fis_1

0.890

fis_3

0.890

trmD

0.794

Ljam_2057

0.742

Ljam_0001

0.689

rnpA

0.689

fis_2

0.672

rpsU

0.647

rpsP

0.636

suhB_2

0.635

Your Current Organism:

Legionella jamestowniensis

NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Ljam_0001	Ljam_2056	Ljam_0001	Ljam_2056	Lysophospholipase A.	Nitrogen regulation protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.	0.689
Ljam_0001	rpsP	Ljam_0001	Ljam_2268	Lysophospholipase A.	30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.783
Ljam_0001	rpsU	Ljam_0001	Ljam_2601	Lysophospholipase A.	30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.790
Ljam_0001	trmD	Ljam_0001	Ljam_2266	Lysophospholipase A.	tRNA (guanine N1) methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.	0.441
Ljam_2056	Ljam_0001	Ljam_2056	Ljam_0001	Nitrogen regulation protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.	Lysophospholipase A.	0.689
Ljam_2056	Ljam_2057	Ljam_2056	Ljam_2057	Nitrogen regulation protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.	Hypothetical protein.	0.742
Ljam_2056	fis_1	Ljam_2056	Ljam_0837	Nitrogen regulation protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.	DNA-binding protein fis; Belongs to the transcriptional regulatory Fis family.	0.890
Ljam_2056	fis_2	Ljam_2056	Ljam_1398	Nitrogen regulation protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.	Fis transcriptional activator; Belongs to the transcriptional regulatory Fis family.	0.672
Ljam_2056	fis_3	Ljam_2056	Ljam_1606	Nitrogen regulation protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.	Global DNA-binding transcriptional dual regulator; Belongs to the transcriptional regulatory Fis family.	0.890
Ljam_2056	rnpA	Ljam_2056	Ljam_1913	Nitrogen regulation protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.	Ribonuclease P protein component (RNase P); RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	0.689
Ljam_2056	rpsP	Ljam_2056	Ljam_2268	Nitrogen regulation protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.	30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.636
Ljam_2056	rpsU	Ljam_2056	Ljam_2601	Nitrogen regulation protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.	30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.647
Ljam_2056	suhB_2	Ljam_2056	Ljam_1404	Nitrogen regulation protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.	Inositol-1-monophosphatase.	0.635
Ljam_2056	trmD	Ljam_2056	Ljam_2266	Nitrogen regulation protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.	tRNA (guanine N1) methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.	0.794
Ljam_2057	Ljam_2056	Ljam_2057	Ljam_2056	Hypothetical protein.	Nitrogen regulation protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.	0.742
fis_1	Ljam_2056	Ljam_0837	Ljam_2056	DNA-binding protein fis; Belongs to the transcriptional regulatory Fis family.	Nitrogen regulation protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.	0.890
fis_1	rnpA	Ljam_0837	Ljam_1913	DNA-binding protein fis; Belongs to the transcriptional regulatory Fis family.	Ribonuclease P protein component (RNase P); RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	0.412
fis_2	Ljam_2056	Ljam_1398	Ljam_2056	Fis transcriptional activator; Belongs to the transcriptional regulatory Fis family.	Nitrogen regulation protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.	0.672
fis_2	rnpA	Ljam_1398	Ljam_1913	Fis transcriptional activator; Belongs to the transcriptional regulatory Fis family.	Ribonuclease P protein component (RNase P); RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	0.432
fis_3	Ljam_2056	Ljam_1606	Ljam_2056	Global DNA-binding transcriptional dual regulator; Belongs to the transcriptional regulatory Fis family.	Nitrogen regulation protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.	0.890

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