Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ljam_2089FAD dependent oxidoreductase. (563 aa)    
Predicted Functional Partners:
Ljam_0751
Oxidoreductase.
  
     0.736
Ljam_1060
Polyketide synthase.
 
 0.701
Ljam_0503
Polyketide synthase.
 
 0.700
galE
NAD dependent epimerase/dehydratase.
  
   0.607
Ljam_2100
Cytochrome P450.
  
  0.556
Ljam_2296
Cytochrome P450.
  
  0.548
Ljam_0596
(2-pyrone-4,6-)dicarboxylic acid hydrolase.
  
  
  0.508
Ljam_1745
Glutamine amidotransferase.
  
     0.470
puuB
Gamma-glutamylputrescine oxidoreductase.
   
 
 0.467
Ljam_1221
Hypothetical protein.
  
     0.439
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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