Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ljam_0445 | Ljam_0503 | Ljam_0445 | Ljam_0503 | Acyltransferase. | Polyketide synthase. | 0.893 |
Ljam_0445 | Ljam_1060 | Ljam_0445 | Ljam_1060 | Acyltransferase. | Polyketide synthase. | 0.893 |
Ljam_0445 | Ljam_2219 | Ljam_0445 | Ljam_2219 | Acyltransferase. | Phospholipase/carboxylesterase. | 0.503 |
Ljam_0445 | dnaK | Ljam_0445 | Ljam_2735 | Acyltransferase. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.503 |
Ljam_0503 | Ljam_0445 | Ljam_0503 | Ljam_0445 | Polyketide synthase. | Acyltransferase. | 0.893 |
Ljam_0503 | Ljam_0907 | Ljam_0503 | Ljam_0907 | Polyketide synthase. | Rho GTPase (Miro-like). | 0.502 |
Ljam_0503 | Ljam_1060 | Ljam_0503 | Ljam_1060 | Polyketide synthase. | Polyketide synthase. | 0.999 |
Ljam_0503 | Ljam_1110 | Ljam_0503 | Ljam_1110 | Polyketide synthase. | Rho GTPase (Miro-like). | 0.502 |
Ljam_0503 | Ljam_1202 | Ljam_0503 | Ljam_1202 | Polyketide synthase. | Rho GTPase (Miro-like). | 0.502 |
Ljam_0503 | Ljam_2219 | Ljam_0503 | Ljam_2219 | Polyketide synthase. | Phospholipase/carboxylesterase. | 0.532 |
Ljam_0503 | Ljam_2220 | Ljam_0503 | Ljam_2220 | Polyketide synthase. | Oligoketide cyclase/lipid transporter protein. | 0.721 |
Ljam_0503 | Ljam_2829 | Ljam_0503 | Ljam_2829 | Polyketide synthase. | Rho GTPase (Miro-like). | 0.502 |
Ljam_0503 | dnaK | Ljam_0503 | Ljam_2735 | Polyketide synthase. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.688 |
Ljam_0907 | Ljam_0503 | Ljam_0907 | Ljam_0503 | Rho GTPase (Miro-like). | Polyketide synthase. | 0.502 |
Ljam_0907 | Ljam_1060 | Ljam_0907 | Ljam_1060 | Rho GTPase (Miro-like). | Polyketide synthase. | 0.502 |
Ljam_0907 | Ljam_2219 | Ljam_0907 | Ljam_2219 | Rho GTPase (Miro-like). | Phospholipase/carboxylesterase. | 0.593 |
Ljam_1060 | Ljam_0445 | Ljam_1060 | Ljam_0445 | Polyketide synthase. | Acyltransferase. | 0.893 |
Ljam_1060 | Ljam_0503 | Ljam_1060 | Ljam_0503 | Polyketide synthase. | Polyketide synthase. | 0.999 |
Ljam_1060 | Ljam_0907 | Ljam_1060 | Ljam_0907 | Polyketide synthase. | Rho GTPase (Miro-like). | 0.502 |
Ljam_1060 | Ljam_1110 | Ljam_1060 | Ljam_1110 | Polyketide synthase. | Rho GTPase (Miro-like). | 0.502 |
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