STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pasIPersistence and stress-resistance antitoxin PasI; Belongs to the UPF0125 (RnfH) family. (91 aa)    
Predicted Functional Partners:
Ljam_2220
Oligoketide cyclase/lipid transporter protein.
 
  
 0.901
Ljam_2219
Phospholipase/carboxylesterase.
       0.802
rnfB
Electron transport complex protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
 
   
 0.685
sspB
ClpXP protease specificity-enhancing factor.
  
     0.506
Ljam_2379
Transmembrane protein.
 
     0.451
Ljam_0105
Membrane fusogenic activity.
  
     0.435
Ljam_0864
DNA polymerase III, delta subunit.
 
     0.415
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.