STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ljam_2248Amino acid (glutamine) ABC transporter permease. (214 aa)    
Predicted Functional Partners:
Ljam_2247
ABC transporter ATP-binding protein.
 0.998
yqiX
Amino acid ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 0.997
artJ
Arginine transport system periplasmic binding protein; Belongs to the bacterial solute-binding protein 3 family.
 0.976
Ljam_0181
Putative amino acid ABC transporter, periplasmic binding protein.
 0.962
Ljam_2203
Arginine ABC transporter substrate-binding protein.
 
 0.881
Ljam_2067
Arginine-binding periplasmic protein; Belongs to the bacterial solute-binding protein 3 family.
 
 0.873
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
    0.847
argH
Argininosuccinate lyase.
  
  
 0.830
argR
Arginine repressor ArgR; Regulates arginine biosynthesis genes.
 
   
 0.676
ugpC
Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily.
 
  
 0.539
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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