Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ljam_0503 | Ljam_1060 | Ljam_0503 | Ljam_1060 | Polyketide synthase. | Polyketide synthase. | 0.999 |
Ljam_0503 | Ljam_1459 | Ljam_0503 | Ljam_1459 | Polyketide synthase. | Non-ribosomal peptide synthetase/polyketide synthetase. | 0.999 |
Ljam_0503 | Ljam_1460 | Ljam_0503 | Ljam_1460 | Polyketide synthase. | Polyketide synthase. | 0.999 |
Ljam_0503 | Ljam_2805 | Ljam_0503 | Ljam_2805 | Polyketide synthase. | Hypothetical protein. | 0.997 |
Ljam_0503 | fadB | Ljam_0503 | Ljam_0858 | Polyketide synthase. | 3-hydroxyacyl CoA dehydrogenase oxidoreductase protein. | 0.993 |
Ljam_0503 | tolR | Ljam_0503 | Ljam_2357 | Polyketide synthase. | Membrane spanning protein in TolA-TolQ-TolR complex; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.412 |
Ljam_0503 | ybgC_2 | Ljam_0503 | Ljam_2355 | Polyketide synthase. | acyl-CoA thioesterase. | 0.994 |
Ljam_0503 | yfcX | Ljam_0503 | Ljam_0647 | Polyketide synthase. | Enoyl CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.993 |
Ljam_1060 | Ljam_0503 | Ljam_1060 | Ljam_0503 | Polyketide synthase. | Polyketide synthase. | 0.999 |
Ljam_1060 | Ljam_1459 | Ljam_1060 | Ljam_1459 | Polyketide synthase. | Non-ribosomal peptide synthetase/polyketide synthetase. | 0.999 |
Ljam_1060 | Ljam_1460 | Ljam_1060 | Ljam_1460 | Polyketide synthase. | Polyketide synthase. | 0.999 |
Ljam_1060 | Ljam_2805 | Ljam_1060 | Ljam_2805 | Polyketide synthase. | Hypothetical protein. | 0.997 |
Ljam_1060 | fadB | Ljam_1060 | Ljam_0858 | Polyketide synthase. | 3-hydroxyacyl CoA dehydrogenase oxidoreductase protein. | 0.993 |
Ljam_1060 | tolR | Ljam_1060 | Ljam_2357 | Polyketide synthase. | Membrane spanning protein in TolA-TolQ-TolR complex; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.412 |
Ljam_1060 | ybgC_2 | Ljam_1060 | Ljam_2355 | Polyketide synthase. | acyl-CoA thioesterase. | 0.994 |
Ljam_1060 | yfcX | Ljam_1060 | Ljam_0647 | Polyketide synthase. | Enoyl CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.993 |
Ljam_1459 | Ljam_0503 | Ljam_1459 | Ljam_0503 | Non-ribosomal peptide synthetase/polyketide synthetase. | Polyketide synthase. | 0.999 |
Ljam_1459 | Ljam_1060 | Ljam_1459 | Ljam_1060 | Non-ribosomal peptide synthetase/polyketide synthetase. | Polyketide synthase. | 0.999 |
Ljam_1459 | Ljam_1460 | Ljam_1459 | Ljam_1460 | Non-ribosomal peptide synthetase/polyketide synthetase. | Polyketide synthase. | 0.999 |
Ljam_1459 | Ljam_2805 | Ljam_1459 | Ljam_2805 | Non-ribosomal peptide synthetase/polyketide synthetase. | Hypothetical protein. | 0.998 |
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