STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ljam_2418Major Facilitator Superfamily protein. (899 aa)    
Predicted Functional Partners:
Ljam_2417
Cyclic nucleotide-binding protein.
     0.905
efp
Translation elongation factor P (EF-P); Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family.
  
 0.775
korA
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
   
 
  0.620
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
    0.546
Ljam_1547
2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion.
   
 
  0.545
Ljam_2416
Hypothetical protein.
       0.540
fixL
Sensor histidine kinase.
 
     0.514
Ljam_2025
Trehalose-6-phosphate synthase.
  
     0.465
gpi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
  
  0.443
Ljam_0736
Putative Heparan-alpha-glucosaminide N-acetyltransferase.
  
     0.438
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
Server load: very high (>100%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.