Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Ljam_0247 | Ljam_2419 | Ljam_0247 | Ljam_2419 | DotB. | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | 0.840 |
| Ljam_0247 | comA | Ljam_0247 | Ljam_0901 | DotB. | DNA uptake/competence protein ComA. | 0.542 |
| Ljam_0247 | lspE | Ljam_0247 | Ljam_0572 | DotB. | Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | 0.445 |
| Ljam_0247 | pilB | Ljam_0247 | Ljam_2421 | DotB. | Pilus assembly protein PilB. | 0.443 |
| Ljam_0247 | pilC | Ljam_0247 | Ljam_2420 | DotB. | Pilus assembly protein PilC. | 0.813 |
| Ljam_0247 | pilM | Ljam_0247 | Ljam_1347 | DotB. | Tfp pilus assembly protein, ATPase PilM. | 0.492 |
| Ljam_0247 | pilQ | Ljam_0247 | Ljam_1343 | DotB. | Type IV pilus (Tfp) assembly protein PilQ. | 0.610 |
| Ljam_0846 | Ljam_2419 | Ljam_0846 | Ljam_2419 | General secretion pathway protein LspH. | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | 0.508 |
| Ljam_0846 | comA | Ljam_0846 | Ljam_0901 | General secretion pathway protein LspH. | DNA uptake/competence protein ComA. | 0.623 |
| Ljam_0846 | lspE | Ljam_0846 | Ljam_0572 | General secretion pathway protein LspH. | Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | 0.774 |
| Ljam_0846 | lspG | Ljam_0846 | Ljam_0845 | General secretion pathway protein LspH. | Type II secretory pathway protein LspG. | 0.918 |
| Ljam_0846 | lspI | Ljam_0846 | Ljam_0847 | General secretion pathway protein LspH. | Type II secretory pathway protein LspI. | 0.964 |
| Ljam_0846 | pilB | Ljam_0846 | Ljam_2421 | General secretion pathway protein LspH. | Pilus assembly protein PilB. | 0.737 |
| Ljam_0846 | pilC | Ljam_0846 | Ljam_2420 | General secretion pathway protein LspH. | Pilus assembly protein PilC. | 0.651 |
| Ljam_2419 | Ljam_0247 | Ljam_2419 | Ljam_0247 | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | DotB. | 0.840 |
| Ljam_2419 | Ljam_0846 | Ljam_2419 | Ljam_0846 | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | General secretion pathway protein LspH. | 0.508 |
| Ljam_2419 | comA | Ljam_2419 | Ljam_0901 | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | DNA uptake/competence protein ComA. | 0.762 |
| Ljam_2419 | lspE | Ljam_2419 | Ljam_0572 | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | 0.892 |
| Ljam_2419 | lspG | Ljam_2419 | Ljam_0845 | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Type II secretory pathway protein LspG. | 0.616 |
| Ljam_2419 | lspI | Ljam_2419 | Ljam_0847 | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Type II secretory pathway protein LspI. | 0.562 |
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