Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Ljam_0503 | Ljam_1060 | Ljam_0503 | Ljam_1060 | Polyketide synthase. | Polyketide synthase. | 0.999 |
| Ljam_0503 | Ljam_1149 | Ljam_0503 | Ljam_1149 | Polyketide synthase. | Peptide synthetase, non-ribosomal; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.999 |
| Ljam_0503 | Ljam_2805 | Ljam_0503 | Ljam_2805 | Polyketide synthase. | Hypothetical protein. | 0.997 |
| Ljam_0503 | ala_1 | Ljam_0503 | Ljam_2431 | Polyketide synthase. | D-alanine-aminotransferase. | 0.828 |
| Ljam_0503 | gcvH | Ljam_0503 | Ljam_2076 | Polyketide synthase. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.810 |
| Ljam_0503 | lipA | Ljam_0503 | Ljam_1026 | Polyketide synthase. | Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | 0.454 |
| Ljam_0503 | lipB | Ljam_0503 | Ljam_2429 | Polyketide synthase. | Lipoyltransferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.859 |
| Ljam_1060 | Ljam_0503 | Ljam_1060 | Ljam_0503 | Polyketide synthase. | Polyketide synthase. | 0.999 |
| Ljam_1060 | Ljam_1149 | Ljam_1060 | Ljam_1149 | Polyketide synthase. | Peptide synthetase, non-ribosomal; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.999 |
| Ljam_1060 | Ljam_2805 | Ljam_1060 | Ljam_2805 | Polyketide synthase. | Hypothetical protein. | 0.997 |
| Ljam_1060 | ala_1 | Ljam_1060 | Ljam_2431 | Polyketide synthase. | D-alanine-aminotransferase. | 0.828 |
| Ljam_1060 | gcvH | Ljam_1060 | Ljam_2076 | Polyketide synthase. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.810 |
| Ljam_1060 | lipA | Ljam_1060 | Ljam_1026 | Polyketide synthase. | Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | 0.454 |
| Ljam_1060 | lipB | Ljam_1060 | Ljam_2429 | Polyketide synthase. | Lipoyltransferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.859 |
| Ljam_1149 | Ljam_0503 | Ljam_1149 | Ljam_0503 | Peptide synthetase, non-ribosomal; Belongs to the ATP-dependent AMP-binding enzyme family. | Polyketide synthase. | 0.999 |
| Ljam_1149 | Ljam_1060 | Ljam_1149 | Ljam_1060 | Peptide synthetase, non-ribosomal; Belongs to the ATP-dependent AMP-binding enzyme family. | Polyketide synthase. | 0.999 |
| Ljam_1149 | Ljam_2805 | Ljam_1149 | Ljam_2805 | Peptide synthetase, non-ribosomal; Belongs to the ATP-dependent AMP-binding enzyme family. | Hypothetical protein. | 0.998 |
| Ljam_1149 | ala_1 | Ljam_1149 | Ljam_2431 | Peptide synthetase, non-ribosomal; Belongs to the ATP-dependent AMP-binding enzyme family. | D-alanine-aminotransferase. | 0.811 |
| Ljam_1149 | gcvH | Ljam_1149 | Ljam_2076 | Peptide synthetase, non-ribosomal; Belongs to the ATP-dependent AMP-binding enzyme family. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.739 |
| Ljam_1149 | lipB | Ljam_1149 | Ljam_2429 | Peptide synthetase, non-ribosomal; Belongs to the ATP-dependent AMP-binding enzyme family. | Lipoyltransferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.702 |
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