STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ljam_2508Chitin-binding protein. (555 aa)    
Predicted Functional Partners:
Ljam_0160
Glycosyl hydrolase family 81.
  
     0.769
Ljam_0408
Chitinase.
 
  
 0.768
Ljam_1625
Protein kinase domain protein.
  
     0.753
Ljam_2100
Cytochrome P450.
  
    0.717
galE
NAD dependent epimerase/dehydratase.
  
     0.666
Ljam_0741
Sensor histidine kinase/response regulator LuxN.
  
     0.617
Ljam_0485
Von Willebrand factor type A domain protein.
  
     0.608
Ljam_0655
Tn3 transposase DDE domain protein.
  
     0.588
Ljam_2209
Ankyrin repeat-containing protein.
  
     0.567
Ljam_1099
NHL repeat protein.
  
     0.541
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.