Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
Ljam_2519DoxX. (171 aa)    
Predicted Functional Partners:
Ljam_2518
Tellurite resistance protein TehB.
       0.802
Ljam_2520
Amino acid ABC transporter system permease.
 
     0.784
Ljam_0084
Hypothetical protein; Belongs to the UPF0276 family.
 
  
 0.739
Ljam_0083
Hypothetical protein.
  
  
 0.701
gidA
Glucose-inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.
    
 
 0.566
ndh
Respiratory NADH dehydrogenase 2/cupric reductase.
    
  0.490
Ljam_2521
Choloylglycine hydrolase.
       0.482
pacL
Cation efflux transporter.
   
  0.476
ctpA_1
Cation efflux transporter.
   
  0.476
Ljam_0082
Signal peptide protein.
  
  
 0.457
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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