STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
arsCProtein ArsC; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (142 aa)    
Predicted Functional Partners:
Ljam_2526
Hypothetical protein.
 
  
 0.936
Ljam_2529
Transcriptional regulator.
 
  
 0.926
cadI
Cadmium-induced protein CadI.
    0.902
epsL
Putative sugar transferase EpsL.
  
 
 0.843
Ljam_1858
Putative thioredoxin 1; Belongs to the thioredoxin family.
  
 
 0.764
trxA3
Thioredoxin; Belongs to the thioredoxin family.
  
 
 0.763
cpsB
Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
    
 0.661
Ljam_0503
Polyketide synthase.
  
 0.582
Ljam_1060
Polyketide synthase.
  
 0.582
mrp
ATPase; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 0.579
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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