Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
qor_2Quinone oxidoreductase (NADPH:quinone reductase). (316 aa)    
Predicted Functional Partners:
Ljam_0503
Polyketide synthase.
 
 0.999
Ljam_1060
Polyketide synthase.
 
 0.998
Ljam_1460
Polyketide synthase.
 
 0.979
Ljam_2200
Hypothetical protein; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
   
  0.915
fabF_2
3-oxoacyl-ACP synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
   
  0.911
Ljam_1149
Peptide synthetase, non-ribosomal; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.834
Ljam_1456
Peptide synthetase, non-ribosomal.
  
 0.834
Ljam_1459
Non-ribosomal peptide synthetase/polyketide synthetase.
  
 0.725
pta_2
Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase.
 
 0.675
korA
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
     
 0.665
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
Server load: low (28%) [HD]