STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
traLtraL protein. (241 aa)    
Predicted Functional Partners:
traI
TraI protein.
 
   
 0.861
traJ
TraJ protein.
 
     0.858
traC
DNA primase traC.
 
     0.812
traM
traM protein.
       0.802
traK
TraK.
       0.802
traF
Conjugal transfer protein TraF.
 
     0.781
trbD
Conjugal transfer protein trbD.
 
     0.781
traG
Conjugal transfer protein TraG.
 
   
 0.775
trbG
Conjugal transfer protein TrbG.
 
     0.773
trbE
Conjugal transfer protein TrbE.
 
     0.773
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.