STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trbEConjugal transfer protein TrbE. (844 aa)    
Predicted Functional Partners:
trbG
Conjugal transfer protein TrbG.
 
 
 0.993
trbI
Conjugal transfer protein TrbI.
 
 
 0.992
virB
LvhB11.
 
  
 0.981
trbF
Conjugal transfer protein trbF.
 
  
 0.979
trbD
Conjugal transfer protein trbD.
 
  
 0.979
trbL
Conjugal transfer protein TrbL.
 
  
 0.970
traG
Conjugal transfer protein TraG.
 
  
 0.941
traC
DNA primase traC.
 
     0.937
traF
Conjugal transfer protein TraF.
 
   
 0.936
trbC
Conjugal transfer protein TrbC.
   
 0.935
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.