STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ljam_2593Transposase (resolvase, DNA invertase). (202 aa)    
Predicted Functional Partners:
Ljam_0632
Tn3 transposase DDE domain protein.
 
   
 0.722
uvrB_2
UvrABC system protein B.
  
    0.682
Ljam_0655
Tn3 transposase DDE domain protein.
 
   
 0.665
Ljam_2592
Hypothetical protein.
       0.636
Ljam_1029
Hypothetical protein.
   
    0.495
traC
DNA primase traC.
 
   
 0.490
Ljam_2590
Hypothetical protein.
       0.459
Ljam_2555
Transposase.
 
   
 0.415
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.