STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
proAZinc metalloproteinase precursor; Extracellular zinc metalloprotease. (548 aa)    
Predicted Functional Partners:
cpbD
Chitin-binding protein CbpD.
  
  
 0.606
Ljam_1835
Cysteine protease.
  
     0.556
Ljam_2508
Chitin-binding protein.
  
  
 0.535
Ljam_0125
Protein IcmE (DotG).
  
     0.480
Ljam_1709
Aminopeptidase.
 
  
 0.467
Ljam_2694
Zip family transporter.
  
     0.425
amiB
N-acetylmuramoyl-L-alanine amidase.
    
 
 0.422
Ljam_2068
Hypothetical protein; N-terminal GNAT family acetyltransferase.
  
     0.421
yghD
Putative general secretion pathway protein YghD; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
     0.404
Ljam_0200
Putative thermolabile hemolysin.
  
   
 0.400
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.