STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ljam_2628Phenol hydroxylase. (247 aa)    
Predicted Functional Partners:
Ljam_1855
CDP-6-deoxy-delta-3,4-glucoseen reductase.
  
  
 0.802
Ljam_1057
Choline monooxygenase.
 
 
 0.766
alf1
Fructose bisphosphate aldolase.
     
 0.759
fadH
2,4-dienoyl-CoA reductase FadH1.
    
 0.739
Ljam_2710
Cation transport ATPase.
  
 
 0.738
Ljam_1898
Alkane-1-monooxygenase.
  
 
 0.706
Ljam_2913
Metal-sulfur cluster biosynthetic enzyme.
  
 
 0.706
iolG
Myo-inositol-2-dehydrogenase.
  
 
 0.690
Ljam_0791
Bifunctional PutA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
  
  
 0.677
Ljam_0042
Hypothetical protein.
    
 0.637
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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