Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ljam_0226 | Ljam_0503 | Ljam_0226 | Ljam_0503 | Mevalonate diphosphate decarboxylase. | Polyketide synthase. | 0.498 |
Ljam_0226 | Ljam_1060 | Ljam_0226 | Ljam_1060 | Mevalonate diphosphate decarboxylase. | Polyketide synthase. | 0.498 |
Ljam_0226 | Ljam_2681 | Ljam_0226 | Ljam_2681 | Mevalonate diphosphate decarboxylase. | Geranyltranstransferase; Belongs to the FPP/GGPP synthase family. | 0.722 |
Ljam_0226 | fni | Ljam_0226 | Ljam_0216 | Mevalonate diphosphate decarboxylase. | Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.945 |
Ljam_0226 | ispB | Ljam_0226 | Ljam_2665 | Mevalonate diphosphate decarboxylase. | Octaprenyl diphosphate synthase IspB; Belongs to the FPP/GGPP synthase family. | 0.722 |
Ljam_0226 | uppS | Ljam_0226 | Ljam_2652 | Mevalonate diphosphate decarboxylase. | Undecaprenyl pyrophosphate synthase; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di- trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide. | 0.667 |
Ljam_0500 | Ljam_0503 | Ljam_0500 | Ljam_0503 | Electron transferring flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone. | Polyketide synthase. | 0.886 |
Ljam_0500 | Ljam_1060 | Ljam_0500 | Ljam_1060 | Electron transferring flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone. | Polyketide synthase. | 0.863 |
Ljam_0500 | Ljam_1907 | Ljam_0500 | Ljam_1907 | Electron transferring flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone. | FAD dependent oxidoreductase. | 0.855 |
Ljam_0500 | Ljam_2681 | Ljam_0500 | Ljam_2681 | Electron transferring flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone. | Geranyltranstransferase; Belongs to the FPP/GGPP synthase family. | 0.677 |
Ljam_0500 | ispB | Ljam_0500 | Ljam_2665 | Electron transferring flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone. | Octaprenyl diphosphate synthase IspB; Belongs to the FPP/GGPP synthase family. | 0.677 |
Ljam_0503 | Ljam_0226 | Ljam_0503 | Ljam_0226 | Polyketide synthase. | Mevalonate diphosphate decarboxylase. | 0.498 |
Ljam_0503 | Ljam_0500 | Ljam_0503 | Ljam_0500 | Polyketide synthase. | Electron transferring flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone. | 0.886 |
Ljam_0503 | Ljam_1060 | Ljam_0503 | Ljam_1060 | Polyketide synthase. | Polyketide synthase. | 0.999 |
Ljam_0503 | Ljam_1907 | Ljam_0503 | Ljam_1907 | Polyketide synthase. | FAD dependent oxidoreductase. | 0.818 |
Ljam_0503 | Ljam_2681 | Ljam_0503 | Ljam_2681 | Polyketide synthase. | Geranyltranstransferase; Belongs to the FPP/GGPP synthase family. | 0.575 |
Ljam_0503 | Ljam_2683 | Ljam_0503 | Ljam_2683 | Polyketide synthase. | Pyridine nucleotide-disulfide oxidoreductase. | 0.720 |
Ljam_0503 | fni | Ljam_0503 | Ljam_0216 | Polyketide synthase. | Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.597 |
Ljam_0503 | ispB | Ljam_0503 | Ljam_2665 | Polyketide synthase. | Octaprenyl diphosphate synthase IspB; Belongs to the FPP/GGPP synthase family. | 0.575 |
Ljam_0503 | uppS | Ljam_0503 | Ljam_2652 | Polyketide synthase. | Undecaprenyl pyrophosphate synthase; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di- trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide. | 0.534 |
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