Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ljam_0503 | Ljam_1060 | Ljam_0503 | Ljam_1060 | Polyketide synthase. | Polyketide synthase. | 0.999 |
Ljam_0503 | Ljam_2025 | Ljam_0503 | Ljam_2025 | Polyketide synthase. | Trehalose-6-phosphate synthase. | 0.483 |
Ljam_0503 | Ljam_2728 | Ljam_0503 | Ljam_2728 | Polyketide synthase. | HAD-superfamily hydrolase. | 0.484 |
Ljam_0503 | Ljam_2795 | Ljam_0503 | Ljam_2795 | Polyketide synthase. | Phosphatase. | 0.633 |
Ljam_0503 | glpK | Ljam_0503 | Ljam_0595 | Polyketide synthase. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate. | 0.828 |
Ljam_0503 | guaA | Ljam_0503 | Ljam_2310 | Polyketide synthase. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.831 |
Ljam_0503 | hisB | Ljam_0503 | Ljam_1087 | Polyketide synthase. | Imidazole glycerol-phosphate dehydratase/histidinol phosphatase; In the N-terminal section; belongs to the histidinol- phosphatase family. | 0.571 |
Ljam_0503 | ribD | Ljam_0503 | Ljam_1105 | Polyketide synthase. | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.651 |
Ljam_1060 | Ljam_0503 | Ljam_1060 | Ljam_0503 | Polyketide synthase. | Polyketide synthase. | 0.999 |
Ljam_1060 | Ljam_2025 | Ljam_1060 | Ljam_2025 | Polyketide synthase. | Trehalose-6-phosphate synthase. | 0.483 |
Ljam_1060 | Ljam_2728 | Ljam_1060 | Ljam_2728 | Polyketide synthase. | HAD-superfamily hydrolase. | 0.484 |
Ljam_1060 | Ljam_2795 | Ljam_1060 | Ljam_2795 | Polyketide synthase. | Phosphatase. | 0.633 |
Ljam_1060 | glpK | Ljam_1060 | Ljam_0595 | Polyketide synthase. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate. | 0.828 |
Ljam_1060 | guaA | Ljam_1060 | Ljam_2310 | Polyketide synthase. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.831 |
Ljam_1060 | hisB | Ljam_1060 | Ljam_1087 | Polyketide synthase. | Imidazole glycerol-phosphate dehydratase/histidinol phosphatase; In the N-terminal section; belongs to the histidinol- phosphatase family. | 0.571 |
Ljam_1060 | ribD | Ljam_1060 | Ljam_1105 | Polyketide synthase. | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.651 |
Ljam_2025 | Ljam_0503 | Ljam_2025 | Ljam_0503 | Trehalose-6-phosphate synthase. | Polyketide synthase. | 0.483 |
Ljam_2025 | Ljam_1060 | Ljam_2025 | Ljam_1060 | Trehalose-6-phosphate synthase. | Polyketide synthase. | 0.483 |
Ljam_2025 | Ljam_2728 | Ljam_2025 | Ljam_2728 | Trehalose-6-phosphate synthase. | HAD-superfamily hydrolase. | 0.821 |
Ljam_2025 | glpK | Ljam_2025 | Ljam_0595 | Trehalose-6-phosphate synthase. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate. | 0.463 |
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