STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ljam_2809Alkaline phosphatase. (540 aa)    
Predicted Functional Partners:
Ljam_0503
Polyketide synthase.
  
 0.683
Ljam_1060
Polyketide synthase.
  
 0.683
Ljam_0736
Putative Heparan-alpha-glucosaminide N-acetyltransferase.
  
  
  0.643
htpX
M48 family peptidase; Belongs to the peptidase M48B family.
       0.643
Ljam_2329
Methyltransferase.
  
   0.636
Ljam_2807
(2R)-phospho-3-sulfolactate synthase (ComA).
       0.533
Ljam_2790
Putative Smr domain protein.
  
 0.530
Ljam_0449
Hypothetical protein.
  
     0.460
iraA
Small-molecule methyltransferase IraA.
  
     0.445
Ljam_2418
Major Facilitator Superfamily protein.
  
 
  0.409
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.