STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ljam_2862Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (292 aa)    
Predicted Functional Partners:
Ljam_0098
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.694
proS
prolyl-tRNA synthase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacy [...]
       0.526
Ljam_1656
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.457
Ljam_0503
Polyketide synthase.
     
 0.431
Ljam_1060
Polyketide synthase.
     
 0.431
fixL
Sensor histidine kinase.
   
  
 0.410
Ljam_0183
Sensory box histidine kinase/response regulator.
      
 0.405
Ljam_0431
Sensory box histidine kinase/response regulator.
      
 0.405
Ljam_1150
Sensory box histidine kinase/response regulator.
      
 0.405
Ljam_1227
Sensory box histidine kinase/response regulator.
      
 0.405
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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