Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Ljam_0293 | Ljam_0503 | Ljam_0293 | Ljam_0503 | Aminotransferase class II. | Polyketide synthase. | 0.891 |
| Ljam_0293 | Ljam_1060 | Ljam_0293 | Ljam_1060 | Aminotransferase class II. | Polyketide synthase. | 0.890 |
| Ljam_0293 | Ljam_1149 | Ljam_0293 | Ljam_1149 | Aminotransferase class II. | Peptide synthetase, non-ribosomal; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.788 |
| Ljam_0293 | Ljam_1456 | Ljam_0293 | Ljam_1456 | Aminotransferase class II. | Peptide synthetase, non-ribosomal. | 0.820 |
| Ljam_0293 | Ljam_1460 | Ljam_0293 | Ljam_1460 | Aminotransferase class II. | Polyketide synthase. | 0.759 |
| Ljam_0293 | bioA | Ljam_0293 | Ljam_2463 | Aminotransferase class II. | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.688 |
| Ljam_0293 | bioB | Ljam_0293 | Ljam_2464 | Aminotransferase class II. | Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | 0.699 |
| Ljam_0293 | bioC | Ljam_0293 | Ljam_2883 | Aminotransferase class II. | Biotin synthase BioC; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway. | 0.669 |
| Ljam_0293 | bioD | Ljam_0293 | Ljam_2467 | Aminotransferase class II. | Dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | 0.856 |
| Ljam_0293 | bioH_2 | Ljam_0293 | Ljam_2466 | Aminotransferase class II. | Biotin biosynthesis protein BioH. | 0.484 |
| Ljam_0503 | Ljam_0293 | Ljam_0503 | Ljam_0293 | Polyketide synthase. | Aminotransferase class II. | 0.891 |
| Ljam_0503 | Ljam_1060 | Ljam_0503 | Ljam_1060 | Polyketide synthase. | Polyketide synthase. | 0.999 |
| Ljam_0503 | Ljam_1149 | Ljam_0503 | Ljam_1149 | Polyketide synthase. | Peptide synthetase, non-ribosomal; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.999 |
| Ljam_0503 | Ljam_1456 | Ljam_0503 | Ljam_1456 | Polyketide synthase. | Peptide synthetase, non-ribosomal. | 0.999 |
| Ljam_0503 | Ljam_1460 | Ljam_0503 | Ljam_1460 | Polyketide synthase. | Polyketide synthase. | 0.999 |
| Ljam_0503 | bioA | Ljam_0503 | Ljam_2463 | Polyketide synthase. | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.855 |
| Ljam_0503 | bioB | Ljam_0503 | Ljam_2464 | Polyketide synthase. | Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | 0.575 |
| Ljam_0503 | bioC | Ljam_0503 | Ljam_2883 | Polyketide synthase. | Biotin synthase BioC; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway. | 0.840 |
| Ljam_0503 | bioD | Ljam_0503 | Ljam_2467 | Polyketide synthase. | Dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | 0.613 |
| Ljam_0503 | bioH_2 | Ljam_0503 | Ljam_2466 | Polyketide synthase. | Biotin biosynthesis protein BioH. | 0.973 |
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