STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM38846.1Two-component system, OmpR family, sensor histidine kinase SenX3. (414 aa)    
Predicted Functional Partners:
SFM38871.1
Two-component system, OmpR family, response regulator RegX3.
  0.996
SFO95209.1
Two-component system, OmpR family, response regulator MtrA.
  0.922
SFO48298.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  0.919
SFN02892.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  0.918
SFN55186.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  0.918
SFN88195.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  0.918
SFO38384.1
Two-component system, OmpR family, response regulator.
  0.916
SFO45195.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  0.916
SFO79265.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  0.916
SFO16206.1
Two-component system, OmpR family, response regulator MprA.
  0.915
Your Current Organism:
Saccharopolyspora antimicrobica
NCBI taxonomy Id: 455193
Other names: CCM 7463, DSM 45119, JCM 16610, KCTC 19303, S. antimicrobica, Saccharopolyspora antimicrobica Yuan et al. 2008, strain I05-00074
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.