STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM74414.1Pimeloyl-ACP methyl ester carboxylesterase. (261 aa)    
Predicted Functional Partners:
SFN81249.1
Polyketide synthase 12.
  
 0.858
SFO37635.1
Myxalamid-type polyketide synthase MxaB.
  
 0.858
SFN16151.1
Nonribosomal peptide synthetase DhbF.
   
 0.758
SFM74383.1
fatty-acyl-CoA synthase.
   
  0.741
SFM74442.1
Regulatory protein, tetR family.
       0.651
SFO41159.1
Phosphopantetheine attachment site.
   
  0.634
SFO24333.1
Amino acid adenylation domain-containing protein.
   
  0.614
SFM74482.1
2-polyprenyl-6-methoxyphenol hydroxylase.
  
 
  0.526
SFN81281.1
Thioester reductase domain-containing protein.
   
 0.493
SFN07805.1
Acyl carrier protein.
    
  0.469
Your Current Organism:
Saccharopolyspora antimicrobica
NCBI taxonomy Id: 455193
Other names: CCM 7463, DSM 45119, JCM 16610, KCTC 19303, S. antimicrobica, Saccharopolyspora antimicrobica Yuan et al. 2008, strain I05-00074
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.