STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM46670.1DNA-binding transcriptional regulator, AcrR family. (181 aa)    
Predicted Functional Partners:
SFM46859.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD.
 
     0.688
SFM46750.1
oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase.
 
     0.640
SFM46886.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
 
     0.624
SFM46785.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA.
 
     0.618
SFM46836.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC.
 
     0.607
SFM46722.1
acyl-CoA thioesterase.
 
     0.605
SFM46693.1
phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
     0.602
SFM46814.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB.
 
     0.600
SFN59120.1
DNA-binding transcriptional regulator, AcrR family.
  
     0.475
Your Current Organism:
Saccharopolyspora antimicrobica
NCBI taxonomy Id: 455193
Other names: CCM 7463, DSM 45119, JCM 16610, KCTC 19303, S. antimicrobica, Saccharopolyspora antimicrobica Yuan et al. 2008, strain I05-00074
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.