STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM37766.1Ketosteroid isomerase-related protein. (121 aa)    
Predicted Functional Partners:
SFM37742.1
Pimeloyl-ACP methyl ester carboxylesterase.
       0.535
SFM37786.1
Protein of unknown function.
       0.527
SFM37829.1
ATPase components of ABC transporters with duplicated ATPase domains.
       0.527
SFM54237.1
4-carboxymuconolactone decarboxylase/3-oxoadipate enol-lactonase / 4-carboxymuconolactone decarboxylase.
    
  0.420
SFM37713.1
Regulatory protein, tetR family.
       0.401
Your Current Organism:
Saccharopolyspora antimicrobica
NCBI taxonomy Id: 455193
Other names: CCM 7463, DSM 45119, JCM 16610, KCTC 19303, S. antimicrobica, Saccharopolyspora antimicrobica Yuan et al. 2008, strain I05-00074
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.