Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFN21655.1 | SFN21672.1 | SAMN05421805_103281 | SAMN05421805_103282 | D-serine deaminase, pyridoxal phosphate-dependent. | L-gulonolactone oxidase. | 0.867 |
SFN21655.1 | SFN39537.1 | SAMN05421805_103281 | SAMN05421805_104222 | D-serine deaminase, pyridoxal phosphate-dependent. | Trans-aconitate 2-methyltransferase. | 0.483 |
SFN21655.1 | SFO42506.1 | SAMN05421805_103281 | SAMN05421805_114106 | D-serine deaminase, pyridoxal phosphate-dependent. | FAD/FMN-containing dehydrogenase. | 0.744 |
SFN21655.1 | SFP07140.1 | SAMN05421805_103281 | SAMN05421805_1402 | D-serine deaminase, pyridoxal phosphate-dependent. | Lysophospholipase L1. | 0.677 |
SFN21672.1 | SFN21655.1 | SAMN05421805_103282 | SAMN05421805_103281 | L-gulonolactone oxidase. | D-serine deaminase, pyridoxal phosphate-dependent. | 0.867 |
SFN21672.1 | SFP07140.1 | SAMN05421805_103282 | SAMN05421805_1402 | L-gulonolactone oxidase. | Lysophospholipase L1. | 0.540 |
SFN39537.1 | SFN21655.1 | SAMN05421805_104222 | SAMN05421805_103281 | Trans-aconitate 2-methyltransferase. | D-serine deaminase, pyridoxal phosphate-dependent. | 0.483 |
SFO42506.1 | SFN21655.1 | SAMN05421805_114106 | SAMN05421805_103281 | FAD/FMN-containing dehydrogenase. | D-serine deaminase, pyridoxal phosphate-dependent. | 0.744 |
SFP07140.1 | SFN21655.1 | SAMN05421805_1402 | SAMN05421805_103281 | Lysophospholipase L1. | D-serine deaminase, pyridoxal phosphate-dependent. | 0.677 |
SFP07140.1 | SFN21672.1 | SAMN05421805_1402 | SAMN05421805_103282 | Lysophospholipase L1. | L-gulonolactone oxidase. | 0.540 |