Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFM41345.1 | SFO17658.1 | SAMN05421805_101187 | SAMN05421805_110141 | Protein of unknown function. | Cytosine permease. | 0.525 |
SFO17634.1 | SFO17658.1 | SAMN05421805_110140 | SAMN05421805_110141 | Hypothetical protein. | Cytosine permease. | 0.506 |
SFO17658.1 | SFM41345.1 | SAMN05421805_110141 | SAMN05421805_101187 | Cytosine permease. | Protein of unknown function. | 0.525 |
SFO17658.1 | SFO17634.1 | SAMN05421805_110141 | SAMN05421805_110140 | Cytosine permease. | Hypothetical protein. | 0.506 |
SFO17658.1 | SFO17680.1 | SAMN05421805_110141 | SAMN05421805_110142 | Cytosine permease. | N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit. | 0.870 |
SFO17658.1 | SFO17706.1 | SAMN05421805_110141 | SAMN05421805_110143 | Cytosine permease. | Hypothetical protein. | 0.869 |
SFO17658.1 | SFO17733.1 | SAMN05421805_110141 | SAMN05421805_110144 | Cytosine permease. | Hypothetical protein. | 0.869 |
SFO17658.1 | SFO17830.1 | SAMN05421805_110141 | SAMN05421805_110147 | Cytosine permease. | Hypothetical protein. | 0.839 |
SFO17658.1 | SFO17866.1 | SAMN05421805_110141 | SAMN05421805_110148 | Cytosine permease. | PucR C-terminal helix-turn-helix domain-containing protein. | 0.822 |
SFO17658.1 | carA | SAMN05421805_110141 | SAMN05421805_106264 | Cytosine permease. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.499 |
SFO17658.1 | carB | SAMN05421805_110141 | SAMN05421805_106265 | Cytosine permease. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.504 |
SFO17658.1 | pyrB | SAMN05421805_110141 | SAMN05421805_106261 | Cytosine permease. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.518 |
SFO17680.1 | SFO17658.1 | SAMN05421805_110142 | SAMN05421805_110141 | N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit. | Cytosine permease. | 0.870 |
SFO17680.1 | SFO17706.1 | SAMN05421805_110142 | SAMN05421805_110143 | N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit. | Hypothetical protein. | 0.994 |
SFO17680.1 | SFO17733.1 | SAMN05421805_110142 | SAMN05421805_110144 | N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit. | Hypothetical protein. | 0.994 |
SFO17680.1 | SFO17830.1 | SAMN05421805_110142 | SAMN05421805_110147 | N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit. | Hypothetical protein. | 0.986 |
SFO17680.1 | SFO17866.1 | SAMN05421805_110142 | SAMN05421805_110148 | N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit. | PucR C-terminal helix-turn-helix domain-containing protein. | 0.858 |
SFO17706.1 | SFO17658.1 | SAMN05421805_110143 | SAMN05421805_110141 | Hypothetical protein. | Cytosine permease. | 0.869 |
SFO17706.1 | SFO17680.1 | SAMN05421805_110143 | SAMN05421805_110142 | Hypothetical protein. | N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit. | 0.994 |
SFO17706.1 | SFO17733.1 | SAMN05421805_110143 | SAMN05421805_110144 | Hypothetical protein. | Hypothetical protein. | 0.788 |
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