STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO15732.1Hypothetical protein. (252 aa)    
Predicted Functional Partners:
SFO55443.1
Protein of unknown function.
  
    0.779
SFN57674.1
TIGR02569 family protein.
 
     0.778
SFM47978.1
Hypothetical protein.
  
   
 0.776
SFN57332.1
Hypothetical protein.
  
     0.774
SFO47030.1
Hypothetical protein.
  
     0.774
SFN98000.1
Dienelactone hydrolase.
  
     0.773
SFO03238.1
Hypothetical protein.
  
     0.772
SFO73701.1
Hypothetical protein.
  
     0.772
SFN19597.1
Septum formation.
  
     0.771
SFN20362.1
Protein of unknown function.
  
     0.771
Your Current Organism:
Saccharopolyspora antimicrobica
NCBI taxonomy Id: 455193
Other names: CCM 7463, DSM 45119, JCM 16610, KCTC 19303, S. antimicrobica, Saccharopolyspora antimicrobica Yuan et al. 2008, strain I05-00074
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.