STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO57811.1Diadenosine tetraphosphate (Ap4A) hydrolase. (155 aa)    
Predicted Functional Partners:
SFO37464.1
Sulfate adenylyltransferase.
    
  0.639
SFO57855.1
Glycolate oxidase FAD binding subunit.
   
   0.524
SFO57881.1
Glycolate oxidase.
   
   0.524
SFN60450.1
ferredoxin--NADP+ reductase.
   
   0.509
SFO57832.1
Glycolate oxidase iron-sulfur subunit.
       0.478
Your Current Organism:
Saccharopolyspora antimicrobica
NCBI taxonomy Id: 455193
Other names: CCM 7463, DSM 45119, JCM 16610, KCTC 19303, S. antimicrobica, Saccharopolyspora antimicrobica Yuan et al. 2008, strain I05-00074
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.