Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFO62704.1 | SFO62738.1 | SAMN05421805_11991 | SAMN05421805_11993 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Hypothetical protein. | 0.773 |
SFO62704.1 | SFO62754.1 | SAMN05421805_11991 | SAMN05421805_11994 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Hypothetical protein. | 0.432 |
SFO62704.1 | ddl-3 | SAMN05421805_11991 | SAMN05421805_11992 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | D-alanine-D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.974 |
SFO62738.1 | SFO62704.1 | SAMN05421805_11993 | SAMN05421805_11991 | Hypothetical protein. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.773 |
SFO62738.1 | SFO62754.1 | SAMN05421805_11993 | SAMN05421805_11994 | Hypothetical protein. | Hypothetical protein. | 0.432 |
SFO62738.1 | ddl-3 | SAMN05421805_11993 | SAMN05421805_11992 | Hypothetical protein. | D-alanine-D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.773 |
SFO62754.1 | SFO62704.1 | SAMN05421805_11994 | SAMN05421805_11991 | Hypothetical protein. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.432 |
SFO62754.1 | SFO62738.1 | SAMN05421805_11994 | SAMN05421805_11993 | Hypothetical protein. | Hypothetical protein. | 0.432 |
SFO62754.1 | ddl-3 | SAMN05421805_11994 | SAMN05421805_11992 | Hypothetical protein. | D-alanine-D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.432 |
ddl-3 | SFO62704.1 | SAMN05421805_11992 | SAMN05421805_11991 | D-alanine-D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.974 |
ddl-3 | SFO62738.1 | SAMN05421805_11992 | SAMN05421805_11993 | D-alanine-D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | Hypothetical protein. | 0.773 |
ddl-3 | SFO62754.1 | SAMN05421805_11992 | SAMN05421805_11994 | D-alanine-D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | Hypothetical protein. | 0.432 |