STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KZM69966.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. (318 aa)    
Predicted Functional Partners:
KZM69967.1
D-ribose-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.994
KZM68935.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.976
KZM68937.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.974
KZM73567.1
Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.974
KZM73577.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.971
KZM69965.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.970
KZM68936.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the binding-protein-dependent transport system permease family.
  
  
 
0.926
KZM74112.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.
  
  
 
0.920
KZM74375.1
Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.882
KZM74113.1
Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.878
Your Current Organism:
Nocardia terpenica
NCBI taxonomy Id: 455432
Other names: DSM 44935, IFM 0706, JCM 13033, N. terpenica, NBRC 100888, Nocardia terpenica Hoshino et al. 2007
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.