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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A341LLY2Uncharacterized protein. (289 aa)    
Predicted Functional Partners:
A0A368Q1B6
BURP domain-containing protein.
  
     0.532
K3YYB6_SETIT
F-box domain-containing protein.
  
     0.526
K4A065_SETIT
BURP domain-containing protein.
  
     0.526
A0A368RPW1
Uncharacterized protein.
  
     0.519
K3YDW0_SETIT
PMEI domain-containing protein.
  
     0.515
K3YSY3_SETIT
F-box domain-containing protein.
  
     0.506
K3YGP5_SETIT
Uncharacterized protein.
  
     0.505
A0A368SLH9
Uncharacterized protein.
  
     0.502
A0A368Q4R7
Uncharacterized protein.
  
     0.499
K3XLL4_SETIT
Phytocyanin domain-containing protein.
  
     0.496
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.