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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A368PI13Inositol-1-monophosphatase. (362 aa)    
Predicted Functional Partners:
K3Y9D4_SETIT
Imidazoleglycerol-phosphate dehydratase; Belongs to the imidazoleglycerol-phosphate dehydratase family.
  
 
 0.825
A0A368PQE1
Aminotran_1_2 domain-containing protein.
  
 
 0.724
K3YRE1_SETIT
Aminotran_1_2 domain-containing protein.
  
 
 0.724
A0A368SUL7
Inos-1-P_synth domain-containing protein.
  
 
 0.717
K4A6T5_SETIT
Inos-1-P_synth domain-containing protein.
  
 
 0.717
K4AJG0_SETIT
Inos-1-P_synth domain-containing protein.
  
 
 0.717
A0A368SDR5
Histidinol dehydrogenase, chloroplastic; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
  
 
 0.702
K3ZQX8_SETIT
Uncharacterized protein.
  
 
 0.702
K4A800_SETIT
Uncharacterized protein; Belongs to the histidinol dehydrogenase family.
  
 
 0.702
K3ZRJ8_SETIT
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.670
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet
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