close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A368PI43Ribosomal_L16 domain-containing protein. (224 aa)    
Predicted Functional Partners:
K3XKF1_SETIT
Ribosomal_L18_c domain-containing protein.
  
 0.975
K3ZX15_SETIT
Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.
 
 0.963
K4AF78_SETIT
Uncharacterized protein.
 
 0.962
K3XMS1_SETIT
KOW domain-containing protein.
  
 0.958
K3Y7W6_SETIT
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
  
 0.958
K3ZIS5_SETIT
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
  
 0.958
K3YB64_SETIT
Uncharacterized protein.
   
 0.954
K3ZAK7_SETIT
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
  
 
 0.952
K3YIN8_SETIT
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
 0.950
K3ZVC4_SETIT
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
 0.950
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.