close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A368PIU6Uncharacterized protein. (2005 aa)    
Predicted Functional Partners:
K3ZQF5_SETIT
Vacuolar protein sorting-associated protein 11 homolog; Involved in regulating membrane fusion at the tonoplast and the prevacuolar compartment.
    
 0.972
A0A368R986
Uncharacterized protein.
    
 0.953
K3YG20_SETIT
Pep3_Vps18 domain-containing protein.
    
 0.953
K3XEE6_SETIT
Protein VACUOLELESS1; Required for vacuole biogenesis and vacuole enlargment in dividing and expanding cells. Involved in the docking or fusion of prevacuolar vesicles; Belongs to the VPS16 family.
    
 0.934
A0A368PJN6
Uncharacterized protein.
    
 
 0.902
K3Z3K4_SETIT
CNH domain-containing protein.
  
 
 0.902
A0A0Q3UUU6
CNH domain-containing protein.
   
 0.895
K4A5B8_SETIT
CNH domain-containing protein.
   
 0.895
A0A368QKD5
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.849
A0A368RRA5
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.849
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.