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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A368PIZ7Uncharacterized protein. (398 aa)    
Predicted Functional Partners:
A0A368QGW4
Uncharacterized protein.
  
 0.828
K3YR21_SETIT
Uncharacterized protein.
  
 0.828
K3Z3K0_SETIT
Uncharacterized protein.
  
 0.828
K3ZT54_SETIT
Thioredoxin domain-containing protein.
  
 
 0.817
K3XGU4_SETIT
MoCF_biosynth domain-containing protein.
  
 
 0.782
K3Z8E4_SETIT
Uncharacterized protein.
  
   
 0.672
K3Z8I0_SETIT
DAHP_synth_1 domain-containing protein.
  
   
 0.667
A0A368QTU3
Fe-S cluster assembly protein DRE2.
    
 0.648
K3Z8W8_SETIT
Anamorsin homolog; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis, facilitating the de novo assembly of a [4Fe-4S] cluster on the cytosolic Fe-S scaffold complex. Electrons are transferred from NADPH via a FAD- and FMN-containing diflavin oxidoreductase. Together with the diflavin oxidoreductase, also required for the assembly of the diferric tyrosyl radical cofactor of ribonucleotide reductase (RN [...]
    
 0.648
K3ZDI3_SETIT
Fe-S cluster assembly protein DRE2.
    
 0.648
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet
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