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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A368PKA4S1-like domain-containing protein; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. (142 aa)    
Predicted Functional Partners:
K3ZAK7_SETIT
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
  
 0.990
K3XNB5_SETIT
SUI1 domain-containing protein.
   
 0.985
K3ZAU1_SETIT
SUI1 domain-containing protein.
   
 0.985
K4A319_SETIT
SUI1 domain-containing protein.
   
 0.985
K4A6E4_SETIT
Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.
   
 0.984
K3YSD3_SETIT
W2 domain-containing protein.
  
 0.980
K3Z2L9_SETIT
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
  
 0.979
K3XZZ9_SETIT
Ribosomal_S10 domain-containing protein.
  
 0.978
K4AGM8_SETIT
Ribosomal_S10 domain-containing protein.
  
 0.978
K4AFM8_SETIT
Ribosomal_S10 domain-containing protein.
  
 0.974
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet
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