close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A368PL04FAD-binding PCMH-type domain-containing protein. (442 aa)    
Predicted Functional Partners:
K3Y9K3_SETIT
ETF domain-containing protein.
  
 
 0.560
K4ABT7_SETIT
ETF domain-containing protein.
  
 
 0.559
K3YYX4_SETIT
WD_REPEATS_REGION domain-containing protein.
     
 0.525
A0A0Q3NV19
Uncharacterized protein.
  
 
 0.496
A0A341JQL0
Malate synthase; Belongs to the malate synthase family.
  
 
 0.496
A0A368RVQ5
Malate synthase; Belongs to the malate synthase family.
  
 
 0.496
A0A368Q4Z8
Uncharacterized protein.
    
   0.493
K4A1B3_SETIT
Uncharacterized protein.
    
   0.493
A0A0Q3R0U0
Uncharacterized protein.
  
     0.454
K3Z9P3_SETIT
Uncharacterized protein.
  
   
 0.452
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.