A0A368PL52 protein (Setaria italica) - STRING interaction network

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Score

A0A368PL52

Sm domain-containing protein. (97 aa)

Predicted Functional Partners:

K3YB45_SETIT

0.999

K3ZB47_SETIT

0.999

A0A368RIM6

0.998

LSM5

0.997

K3XNK1_SETIT

0.997

K3ZB54_SETIT

0.997

K3XMX9_SETIT

0.996

K3YKH7_SETIT

0.989

K3YL50_SETIT

0.981

K3ZYM4_SETIT

0.979

Your Current Organism:

Setaria italica

NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A368PL52	A0A368RIM6	A0A368PL52	A0A368RIM6	Sm domain-containing protein.	Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing.	0.998
A0A368PL52	K3XMX9_SETIT	A0A368PL52	K3XMX9	Sm domain-containing protein.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.996
A0A368PL52	K3XNK1_SETIT	A0A368PL52	K3XNK1	Sm domain-containing protein.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.997
A0A368PL52	K3YB45_SETIT	A0A368PL52	K3YB45	Sm domain-containing protein.	Sm domain-containing protein.	0.999
A0A368PL52	K3YKH7_SETIT	A0A368PL52	K3YKH7	Sm domain-containing protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.989
A0A368PL52	K3YL50_SETIT	A0A368PL52	K3YL50	Sm domain-containing protein.	Sm domain-containing protein.	0.981
A0A368PL52	K3ZB47_SETIT	A0A368PL52	K3ZB47	Sm domain-containing protein.	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
A0A368PL52	K3ZB54_SETIT	A0A368PL52	K3ZB54	Sm domain-containing protein.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.997
A0A368PL52	K3ZYM4_SETIT	A0A368PL52	K3ZYM4	Sm domain-containing protein.	Small nuclear ribonucleoprotein G.	0.979
A0A368PL52	LSM5	A0A368PL52	A0A368QJI9	Sm domain-containing protein.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.997
A0A368RIM6	A0A368PL52	A0A368RIM6	A0A368PL52	Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing.	Sm domain-containing protein.	0.998
A0A368RIM6	K3XMX9_SETIT	A0A368RIM6	K3XMX9	Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.998
A0A368RIM6	K3XNK1_SETIT	A0A368RIM6	K3XNK1	Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
A0A368RIM6	K3YB45_SETIT	A0A368RIM6	K3YB45	Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing.	Sm domain-containing protein.	0.999
A0A368RIM6	K3YKH7_SETIT	A0A368RIM6	K3YKH7	Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.994
A0A368RIM6	K3ZB47_SETIT	A0A368RIM6	K3ZB47	Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing.	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
A0A368RIM6	K3ZB54_SETIT	A0A368RIM6	K3ZB54	Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
A0A368RIM6	K3ZYM4_SETIT	A0A368RIM6	K3ZYM4	Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing.	Small nuclear ribonucleoprotein G.	0.983
A0A368RIM6	LSM5	A0A368RIM6	A0A368QJI9	Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.998
K3XMX9_SETIT	A0A368PL52	K3XMX9	A0A368PL52	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Sm domain-containing protein.	0.996

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