Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A368PM47Uncharacterized protein. (465 aa)    
Predicted Functional Partners:
K3YPH4_SETIT
Uncharacterized protein.
   
  0.895
K4A8P6_SETIT
Uncharacterized protein.
   
 0.877
K3ZAY7_SETIT
AMPKBI domain-containing protein.
    
 0.858
A0A368QJG5
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
   
 0.847
K3Z326_SETIT
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
   
 0.847
A0A368Q9C0
AMPKBI domain-containing protein.
    
 0.799
K3Z8P2_SETIT
AMPKBI domain-containing protein.
    
 0.799
K4AD48_SETIT
AMPKBI domain-containing protein.
    
 0.799
K4ADU8_SETIT
FLZ-type domain-containing protein.
    
 
 0.781
K3XYF5_SETIT
TPR_REGION domain-containing protein.
    
   0.759
Your Current Organism:
Setaria italica
NCBI taxonomy Id: 4555
Other names: Chaetochloa italica, Chaetochloa italica (L.) Scribn., Panicum italicum, Panicum italicum L., S. italica, Setaria italica (L.) P.Beauv., Setaria viridis subsp. italica, Setaria viridis subsp. italica (L.) Briq., foxtail millet
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